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Spacers (for DNA)
| Spacers | Position | ||
| 5’ | 3’ | int | |
| C3 Spacer | X | X | |
| Spacer 18 | X | ||
| Spacer C12 | X | ||
| dSpacer (abasic side) | O | O | X |
C3 Spacer
The C3 Spacer phosphoramidite can be incorporated internally or at the 3'-end of the oligo. Multiple C3 spacers can be added at the 3'-end of an oligo to introduce a long hydrophilic spacer arm for the attachment of fluorophores or other pendent groups.
|
Position
|
Synthesis Scale [µmol]
|
Purification
|
|||||
|
|
0.04
|
0.2
|
1.0
|
15
|
Des
|
HPLC
|
PAGE
|
| 3' |
X
|
X
|
O |
X
|
X | ||
| Int |
X
|
X
|
O |
X
|
X | ||
X = available/on stock
O = on request
Spacer 18
Spacer 18 is an 18-atom hexa-ethyleneglycol spacer. It is the longest spacer arm that can be added as a single modification.
|
Position
|
Synthesis Scale [µmol]
|
Purification
|
|||||
|
|
0.04
|
0.2
|
1.0
|
15
|
Des
|
HPLC
|
PAGE
|
| Int |
X
|
X
|
O |
X
|
X | ||
X = available/on stock
O = on request
Spacer C12
Spacer C12 is a 12-carbon spacer that is used to incorporate a long spacer arm into an oligonucleotide. Spacer C12 is frequently used for solid-phase immobilization of DNA probes or aptamers for microarray applications, but can be used for any oligonucleotide-based application requiring a long spacer arm.
|
Position
|
Synthesis Scale [µmol]
|
Purification
|
|||||
|
|
0.04
|
0.2
|
1.0
|
15
|
Des
|
HPLC
|
PAGE
|
| Int |
X
|
X
|
O |
X
|
X | ||
X = available/on stock
O = on request
dSpacer (1’,2’-Dideoxyribose)
The 1’,2’-Dideoxyribose modification is used to introduce a stable abasic site within an oligonucleotide.
|
Position
|
Synthesis Scale [µmol]
|
Purification
|
|||||
|
|
0.04
|
0.2
|
1.0
|
15
|
Des
|
HPLC
|
PAGE
|
| Int |
X
|
X
|
O |
X
|
X | ||
X = available/on stock
O = on request